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Miscellaneous fixes & improvements

jjaenes requested to merge jjaenes/alphafold_on_euler:main into main
  • Fix --skip_minimization
  • Support fastas with multi-line sequences
  • Add --reduced_dbs to run AF2 with —db_preset=reduced_dbs
  • Add --reduced_rsync to skip copying large results files (MSAs, pickles) from the compute nodes
  • Place AF2 output & log files relative to the working directory (-w)
Edited by jjaenes

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