Merge requests · rmuntean / Tracking Changes

Update documentation

!61 · created Mar 06, 2023 by rmuntean
updated Mar 06, 2023
Turn all percents into ratios for freq_bp query.

!60 · created Mar 04, 2023 by rmuntean
- Merged
updated Mar 04, 2023
Add a feature to be able to use JSON arrays in the query output

!59 · created Mar 04, 2023 by rmuntean
- Merged
updated Mar 04, 2023
Update output format to use JSON

!58 · created Feb 24, 2023 by rmuntean
- Merged
updated Mar 01, 2023
Add tutorials

!57 · created Jan 22, 2023 by rmuntean
- Merged
updated Jan 22, 2023
Add 'Run in Docker' option for the main tool.

!56 · created Jan 15, 2023 by rmuntean
- Merged
updated Jan 15, 2023
Add preprocessing script for aws genbank

!55 · created Jul 16, 2022 by rmuntean
[draft] add dockerfile

!54 · created Jul 16, 2022 by rmuntean
- Closed
updated Jan 15, 2023
Add covv_host as a new location static field

!53 · created Jun 21, 2022 by rmuntean
- Merged
- 2
updated Jun 22, 2022
Add covv_host as a new DB field

!52 · created Jun 21, 2022 by rmuntean
- Merged
updated Jun 22, 2022
minor clean

!51 · created Jun 21, 2022 by rmuntean
- Merged
updated Jun 21, 2022
minor clean

!50 · created Jun 21, 2022 by rmuntean
- Merged
updated Jun 21, 2022
add query examples to the tutorial

!49 · created Jun 21, 2022 by rmuntean
- Merged
updated Jun 21, 2022
Tutorial2

!48 · created Jun 21, 2022 by rmuntean
- Merged
updated Jun 21, 2022
add tutorial on GISAID preprocessing

!47 · created Jun 21, 2022 by rmuntean
- Merged
updated Jun 21, 2022
Update readme with the installation steps

!46 · created Jun 18, 2022 by rmuntean
- Merged
updated Jun 18, 2022
Run time optimisation

!45 · created May 27, 2022 by rmuntean
- Merged
updated May 28, 2022
Clean test data

!44 · created May 27, 2022 by rmuntean
- Merged
updated May 27, 2022
Query implementation

!43 · created May 25, 2022 by rmuntean
- Closed
updated Jun 22, 2022
add a Query for printing the most frequent altered sequences

!42 · created May 25, 2022 by rmuntean
- Closed
updated Jun 22, 2022