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Automatic install for pipeline on server

tchervec requested to merge tchervenkov into master

A series of bash scripts which allows to install everything that is needed to run the pipeline on our servers. Three bash scripts, as well as a requirements.txt file, can now be found under ./setup/ :

  • clean.sh : removes everything from setup folder, except the bash scripts and requirements
  • setup.sh : downloads miniconda, create python venv, downloads jdk and maven.
  • activate.sh : activates python venv and adds both jdk and maven to PATH variable

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