sqlite issue: test without pip

Dockerfile

@@ -137,60 +137,63 @@ RUN mamba install -q -c defaults -c conda-forge -c bioconda -c bokeh \
 # Python from pypi
 ##################
 
-RUN PIP_PROXY=http://proxy.ethz.ch:3128 pip3 install --proxy=http://proxy.ethz.ch:3128 --default-timeout=100 \
-  adjustText \
-  anndata \
-  asserts \
-  astroquery \
-  brainpy \
-  brightway25 \
-  Cartopy \
-  deep_translator \
-  einsteinpy \
-  eppy \
-  gmsh \
-  goatools \
-  gseapy \
-  gurobipy \
-  jaxopt \
-  jupyter_ai \
-  keybert \
-  langchain-openai \
-  lmfit \
-  mariopy \
-  mycolorpy \
-  mpl-interactions \
-  mpl_point_clicker \
-  networkit \
-  networkx \
-  numdifftools \
-  obspy \
-  openai \
-  opencv-python opencv-contrib-python \
-  otter-grader \
-  petitRADTRANS \
-  zfit \
-  PyAstronomy \
-  pycosmo \
-  pycryptodome \
-  pyFAI \
-  pymatgen \
-  pypardiso \
-  pyvista \
-  rise \
-  scanpy \
-  sensemapi \
-  scikit-image \
-  scikit-kinematics \
-  summa \
-  tensorflow \
-  "tensorflow-probability[jax]" \
-  torch \
-  umap \
-  umap-learn \
-  vpython \
-  wiktionaryparser \
-  yolov5
+# RUN PIP_PROXY=http://proxy.ethz.ch:3128 pip3 install --proxy=http://proxy.ethz.ch:3128 --default-timeout=100 \
+#   adjustText \
+#   anndata \
+#   asserts \
+#   astroquery \
+#   brainpy \
+#   brightway25 \
+#   Cartopy \
+#   deep_translator \
+#   ecoinvent-interface \
+#   einsteinpy \
+#   eppy \
+#   gmsh \
+#   goatools \
+#   gseapy \
+#   gurobipy \
+#   jaxopt \
+#   jupyterlab-spreadsheet-editor \
+#   jupyter_ai \
+#   keybert \
+#   langchain-openai \
+#   lmfit \
+#   mariopy \
+#   mycolorpy \
+#   mpl-interactions["jupyter"] \
+#   mpl_point_clicker \
+#   networkit \
+#   networkx \
+#   numdifftools \
+#   obspy \
+#   openai \
+#   opencv-python opencv-contrib-python \
+#   otter-grader \
+#   petitRADTRANS \
+#   zfit \
+#   PyAstronomy \
+#   pycosmo \
+#   pycryptodome \
+#   pyFAI \
+#   pymatgen \
+#   pypardiso \
+#   pyvista \
+#   rise \
+#   scanpy \
+#   sensemapi \
+#   scikit-image \
+#   scikit-kinematics \
+#   summa \
+#   tensorflow \
+#   "tensorflow-probability[jax]" \
+#   torch \
+#   umap \
+#   umap-learn \
+#   vpython \
+#   wiktionaryparser \
+#   xgboost \
+#   yolov5
 
 # =====================
 # Packages requested after semester start, should go to the list 2 RUNs above if a major rebuild is planned.