- put all functions in `code` into subfolders relating to different modules: `readin`, `sync`, `preproc`, `model`, `assess`, `utils` (gitlab-issue #58)
- updated deployment `tapas_physio_init` because of that
### Changed
- Toned down and replaced irrelevant peak height and missing cardiac pulse warnings (github issue #51)
Minor Release Notes (R2019a, v7.1.0)
------------------------------------
Bugfix Release Notes (R2018.1.3)
--------------------------------
### Added
- BIDS reader and example (Brain Imaging Data Structure,
http://bids.neuroimaging.io/bids_spec.pdf) for `*_physio.tsv[.gz]/.json` files
- Added BioPac txt-File read-in and example
- Template example with all physio-fields for matlab script and settings as in default SPM batch
- Started unit testing framework in folder `tests`
- example functions for findpeaks and BIDS readin
- reference data saved with example data in subfolder `TestReferenceResults`
- reference data reflects physio structure after running example scripts
with PhysIO R2019a
### Changed
- put all functions in `code` into subfolders relating to different modules:
- Compatibility tested for SPM12, small bugfixes Batch Dependencies
- Cleaner Batch Interface with grouped sub-menus (cfg_choice)
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@@ -121,16 +165,19 @@ Minor Release Notes (r666)
- All peak detections (cardiac/respiratory) now via auto_matched algorithm
- Adapt plots/saving for Matlab R2014b
Major Release Notes (r534)
--------------------------
Major Release Notes (r534, v4.0.0)
----------------------------------
- Read-in of Siemens plain text log files; new example dataset for Siemens
- Speed up and debugging of auto-detection method for noisy cardiac data => new method thresh.cardiac.initial_cpulse_select.method = ???auto_matched???
- Speed up and debugging of auto-detection method for noisy cardiac data => new
- Cardiac and Respiratory response function regressors integrated in workflow (heart rate and breathing volume computation)
- Handling of Cardiac and Respiratory Logfiles only
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@@ -147,14 +195,16 @@ Major Release Notes (r429)
- read-in of custom log files, e.g. for BrainVoyager peripheral data
- more informative plots and commenting (especially in tapas_physio_new).
Minor Release Notes (r354)
--------------------------
Minor Release Notes (r354, v1.1.0)
----------------------------------
- computation of heart and breathing rate in Philips/PPU/main_PPU.m
- prefix of functions with tapas_*
Major Release Notes (r241)
--------------------------
Major Release Notes (r241, v1.0.0)
----------------------------------
- complete modularization of reading/preprocessing/regressor creation for peripheral physiological data
- manual selection of missed heartbeats in ECG/pulse oximetry (courtesy of Jakob Heinzle)
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@@ -164,4 +214,3 @@ Major Release Notes (r241)
- consistent function names (prefixed by "physio_")
NOTE: Your main_ECG/PPU.m etc. scripts from previous versions (<=r159) will not work with this one any more. Please adapt one of the example scripts for your needs (~5 min of work). The main benefit of this version is a complete new variable structure that is more sustainable and makes the code more readable.