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Commit 52136730 authored by holukas's avatar holukas
Browse files

QCL and LGR pressure now converted from Torr to hPa

parent abe4e840
......@@ -2,9 +2,21 @@
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......@@ -395,7 +410,7 @@
<SUITE FILE_PATH="coverage/BICO$main.coverage" NAME="bico Coverage Results" MODIFIED="1598258463691" SOURCE_PROVIDER="com.intellij.coverage.DefaultCoverageFileProvider" RUNNER="coverage.py" COVERAGE_BY_TEST_ENABLED="true" COVERAGE_TRACING_ENABLED="false" WORKING_DIRECTORY="$PROJECT_DIR$/bico" />
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# BICO Changelog
## v0.4.0 - 15 Feb 2021
- changed: For QCL and LGR instruments, PRESS_CELL in Torr is now converted to hPa.
This conversion is done because EddyPro cannot handle Torr as input units for cell pressure during flux calculations. For the conversion, the parameter
`'apply_gain': 1.33322368` was used (was previously set to `1`).
**The following .dblock files are affected:**
- LGR-A.dblock
- QCL-A.dblock
- QCL-A2.dblock
- QCL-A4.dblock
- QCL-C.dblock
- not changed: QCL-A3.dblock because it does not record pressure
- changed: CHANGELOG is now a markup file (.md)
## v0.3.2 - 12 Feb 2021
- fixed: GUI now shows correct date for version
## v0.3.1 - 12 Feb 2021
- small bug: `IRGA75-A-GN1.dblock`: `datablock` was incorrectly named `IRGA75-A`
- added: CHANGELOG.txt
BICO Changelog
==============
v0.3.2 - 12 Feb 2021
- fixed: GUI now shows correct date for version
v0.3.1 - 12 Feb 2021
- bug: IRGA75-A-GN1.dblock: 'datablock' was incorrectly named 'IRGA75-A'
- added: CHANGELOG.txt
run_id=BICO-20210212-154516
run_id=BICO-20210215-175711
# INSTRUMENTS
# ===========
......@@ -16,11 +16,11 @@ instrument_3=LGR-A
# ========
# Source Folder
dir_source=Y:/CH-INO_InnoFarm/20_sonic_ghg/2019
dir_source=A:/FLUXES/x-TEST-FILES
# Time Range
start_date=2019-05-10 11:52
end_date=2019-05-10 12:00
start_date=2019-05-15 19:00
end_date=2019-06-15 19:00
# File Settings
filename_datetime_format=yyyymmddHH.XMM
......@@ -35,15 +35,15 @@ select_random_files=0
# OUTPUT
# ======
dir_out=A:/FLUXES/x-TEST-OUT
dir_out_run=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154516
dir_out_run_log=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154516\log
dir_out_run_plots=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154516\plots
dir_out_run_plots_hires=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154516\plots\hires
dir_out_run_plots_agg=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154516\plots\agg
dir_out_run_raw_data_ascii=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154516\raw_data_ascii
dir_out_run=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175711
dir_out_run_log=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175711\log
dir_out_run_plots=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175711\plots
dir_out_run_plots_hires=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175711\plots\hires
dir_out_run_plots_agg=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175711\plots\agg
dir_out_run_raw_data_ascii=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175711\raw_data_ascii
output_folder_name_prefix=CH-AES
file_compression=None
output_folder_name_prefix=CH-AES_test
file_compression=gzip
add_instr_to_varname=1
......
run_id=BICO-20210212-154456
run_id=BICO-20210215-175450
# INSTRUMENTS
# ===========
......@@ -16,11 +16,11 @@ instrument_3=LGR-A
# ========
# Source Folder
dir_source=Y:/CH-INO_InnoFarm/20_sonic_ghg/2019
dir_source=A:/FLUXES/x-TEST-FILES
# Time Range
start_date=2019-05-10 11:52
end_date=2019-05-10 12:00
start_date=2019-05-15 19:00
end_date=2019-06-15 19:00
# File Settings
filename_datetime_format=yyyymmddHH.XMM
......@@ -35,22 +35,22 @@ select_random_files=0
# OUTPUT
# ======
dir_out=A:/FLUXES/x-TEST-OUT
dir_out_run=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154456
dir_out_run_log=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154456\log
dir_out_run_plots=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154456\plots
dir_out_run_plots_hires=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154456\plots\hires
dir_out_run_plots_agg=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154456\plots\agg
dir_out_run_raw_data_ascii=A:\FLUXES\x-TEST-OUT\CH-AES_BICO-20210212-154456\raw_data_ascii
dir_out_run=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175450
dir_out_run_log=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175450\log
dir_out_run_plots=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175450\plots
dir_out_run_plots_hires=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175450\plots\hires
dir_out_run_plots_agg=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175450\plots\agg
dir_out_run_raw_data_ascii=A:\FLUXES\x-TEST-OUT\CH-AES_test_BICO-20210215-175450\raw_data_ascii
output_folder_name_prefix=CH-AES
file_compression=None
output_folder_name_prefix=CH-AES_test
file_compression=gzip
add_instr_to_varname=1
plot_file_availability=0
plot_ts_hires=0
plot_file_availability=1
plot_ts_hires=1
plot_histogram_hires=0
plot_ts_agg=0
plot_ts_agg=1
# DIRECTORIES
# ===================
......
__version__ = "0.3.2"
__date__ = "12 Feb 2021"
__version__ = "0.4.0"
__date__ = "15 Feb 2021"
__link_source_code__ = "https://gitlab.ethz.ch/holukas/bico"
__link_releases__ = "https://gitlab.ethz.ch/holukas/bico/-/releases"
__link_wiki__ = "https://gitlab.ethz.ch/holukas/bico/-/wikis/home"
......
......@@ -10,7 +10,7 @@ N2O_DRY == {'order': 4, 'bytes': 4, 'format': '>B B B B', 'gain_on_signal
H2O == {'order': 5, 'bytes': 4, 'format': '>B B B B', 'gain_on_signal': 10000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'umol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'LGR-A'}
CH4 == {'order': 6, 'bytes': 4, 'format': '>B B B B', 'gain_on_signal': 10000000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'umol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'LGR-A'}
N2O == {'order': 7, 'bytes': 4, 'format': '>B B B B', 'gain_on_signal': 10000000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'umol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'LGR-A'}
PRESS_CELL == {'order': 8, 'bytes': 2, 'format': '>B B', 'gain_on_signal': 100, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'Torr', 'conversion_type': 'regular', 'datablock': 'LGR-A'}
PRESS_CELL == {'order': 8, 'bytes': 2, 'format': '>B B', 'gain_on_signal': 100, 'offset_on_signal': 0, 'apply_gain': 1.33322368, 'add_offset': 0, 'units': 'hPa', 'conversion_type': 'regular', 'datablock': 'LGR-A'}
T_CELL == {'order': 9, 'bytes': 2, 'format': '>B B', 'gain_on_signal': 100, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'degC', 'conversion_type': 'regular', 'datablock': 'LGR-A'}
T_UNKNOWN == {'order': 10, 'bytes': 2, 'format': '>B B', 'gain_on_signal': 100, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'degC', 'conversion_type': 'regular', 'datablock': 'LGR-A'}
MIRROR_RINGDOWNTIME == {'order': 11, 'bytes': 4, 'format': '>B B B B', 'gain_on_signal': 1000000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'us', 'conversion_type': 'regular', 'datablock': 'LGR-A'}
......
......@@ -14,7 +14,9 @@
- H2O ... H2O molar fraction (in **humid** air), wet mole fraction
- CH4 ... CH4 molar fraction (in **humid** air), wet mole fraction
- N2O ... N2O molar fraction (in **humid** air), wet mole fraction
- PRESS_CELL ... Pressure in cell
- PRESS_CELL ... Pressure in cell, originally output in Torr, but is converted to hPa.
This conversion is done because EddyPro cannot handle Torr as input units for cell pressure
during flux calculations.
- T_CELL ... Temperature in cell
- T_UNKNOWN ... Unknown temperature (similar to T_CELL, maybe around cell somewhere?)
- MIRROR_RINGDOWNTIME ... Mirror ring-down time
......
......@@ -10,7 +10,7 @@ CH4_DRY == {'order': 3, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal'
N2O_DRY == {'order': 4, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'nmol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'QCL-A'}
H2O_DRY == {'order': 5, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'nmol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'QCL-A'}
T_CELL == {'order': 6, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'K', 'conversion_type': 'regular', 'datablock': 'QCL-A'}
PRESS_CELL == {'order': 7, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'Torr', 'conversion_type': 'regular', 'datablock': 'QCL-A'}
PRESS_CELL == {'order': 7, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1.33322368, 'add_offset': 0, 'units': 'hPa', 'conversion_type': 'regular', 'datablock': 'QCL-A'}
# Values extracted from STATUS_CODE:
# ----------------------------------
......
......@@ -24,7 +24,9 @@
- N2O_DRY ... N2O dry mole fraction, mixing ratio, ppb
- H2O_DRY ... H2O dry mole fraction, mixing ratio, ppb
- T_CELL ... Temperature of the measurement cell
- PRESS_CELL ... Pressure in the measurement cell
- PRESS_CELL ... Pressure in the measurement cell, originally output in Torr, but is converted to hPa.
This conversion is done because EddyPro cannot handle Torr as input units for cell pressure
during flux calculations.
## BICO Settings
- For an explanation of the different variable property settings, please see ```_help_bico_settings.md```.
......
......@@ -10,7 +10,7 @@ CH4_DRY == {'order': 3, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal'
N2O_DRY == {'order': 4, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'nmol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'QCL-A2'}
CH4 == {'order': 5, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'nmol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'QCL-A2'}
T_CELL == {'order': 6, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'K', 'conversion_type': 'regular', 'datablock': 'QCL-A2'}
PRESS_CELL == {'order': 7, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'Torr', 'conversion_type': 'regular', 'datablock': 'QCL-A2'}
PRESS_CELL == {'order': 7, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1.33322368, 'add_offset': 0, 'units': 'hPa', 'conversion_type': 'regular', 'datablock': 'QCL-A2'}
# Values extracted from STATUS_CODE:
# ----------------------------------
......
......@@ -24,7 +24,9 @@
- N2O_DRY ... N2O dry mole fraction (in **dry** air), mixing ratio, ppb
- CH4 ... CH4 molar fraction (in **humid** air), wet mole fraction
- T_CELL ... Temperature of the measurement cell
- PRESS_CELL ... Pressure in the measurement cell
- PRESS_CELL ... Pressure in the measurement cell, originally output in Torr, but is converted to hPa.
This conversion is done because EddyPro cannot handle Torr as input units for cell pressure
during flux calculations.
## BICO Settings
- For an explanation of the different variable property settings, please see ```_help_bico_settings.md```.
......
......@@ -10,7 +10,7 @@ CH4_DRY == {'order': 3, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal'
N2O_DRY == {'order': 4, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'nmol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'QCL-A4'}
H2O_DRY == {'order': 5, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'nmol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'QCL-A4'}
T_CELL == {'order': 6, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'K', 'conversion_type': 'regular', 'datablock': 'QCL-A4'}
PRESS_CELL == {'order': 7, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'Torr', 'conversion_type': 'regular', 'datablock': 'QCL-A4'}
PRESS_CELL == {'order': 7, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1.33322368, 'add_offset': 0, 'units': 'hPa', 'conversion_type': 'regular', 'datablock': 'QCL-A4'}
# Values extracted from STATUS_CODE:
# ----------------------------------
......
......@@ -25,7 +25,9 @@ Basically the same as QCL-A, but with gain 1000 on H2O signal instead of gain 1.
- N2O_DRY ... N2O dry mole fraction, mixing ratio, ppb
- H2O_DRY ... H2O dry mole fraction, mixing ratio, ppb
- T_CELL ... Temperature of the measurement cell
- PRESS_CELL ... Pressure in the measurement cell
- PRESS_CELL ... Pressure in the measurement cell, originally output in Torr, but is converted to hPa.
This conversion is done because EddyPro cannot handle Torr as input units for cell pressure
during flux calculations.
## BICO Settings
- For an explanation of the different variable property settings, please see ```_help_bico_settings.md```.
......
......@@ -11,7 +11,7 @@ N2O_DRY == {'order': 4, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal'
CO2_DRY == {'order': 5, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'nmol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'QCL-C'}
H2O_DRY == {'order': 6, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'nmol+1 mol-1', 'conversion_type': 'regular', 'datablock': 'QCL-C'}
T_CELL == {'order': 7, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'K', 'conversion_type': 'regular', 'datablock': 'QCL-C'}
PRESS_CELL == {'order': 8, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'Torr', 'conversion_type': 'regular', 'datablock': 'QCL-C'}
PRESS_CELL == {'order': 8, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1.33322368, 'add_offset': 0, 'units': 'hPa', 'conversion_type': 'regular', 'datablock': 'QCL-C'}
STATUS_WORD == {'order': 9, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'dimensionless', 'conversion_type': 'regular', 'datablock': 'QCL-C'}
VICI == {'order': 10, 'bytes': 4, 'format': 'B B B B', 'gain_on_signal': 1000, 'offset_on_signal': 0, 'apply_gain': 1, 'add_offset': 0, 'units': 'dimensionless', 'conversion_type': 'regular', 'datablock': 'QCL-C'}
......
......@@ -25,7 +25,9 @@
- CO2_DRY ... CO2 dry mole fraction, mixing ratio, ppb
- H2O_DRY ... H2O dry mole fraction, mixing ratio, ppb
- T_CELL ... Temperature of the measurement cell
- PRESS_CELL ... Pressure in the measurement cell
- PRESS_CELL ... Pressure in the measurement cell, originally output in Torr, but is converted to hPa.
This conversion is done because EddyPro cannot handle Torr as input units for cell pressure
during flux calculations.
- STATUS_WORD ...
- VICI ...
......
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