Removed history, due to sensitive data

.gitignore

+.Rproj.user
+.Rhistory
+.RData
+.Ruserdata
+/htfp_wheat_canopy_height_processing.Rproj
+/.idea
+/.RDataTmp
+/Simulation/Runs/

Data/Trait_Validation/trait_data_FPWW024_lot2_trait_id_45_method_id_314.csv

+plot.UID,timestamp,value,corrected_value,spatial_trend,spatial_residual,value_json,responsible,measurement_id,trait.id,trait.label,trait.name,trait.si_unit,method.id,method.label,method.name
+FPWW0240037,20190409T0100+0100,763.0,739.767619265702,23.2323807342976,-11.8272628133867,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240040,20190409T0100+0100,763.0,761.520396955491,1.47960304450862,1.87657736787582,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240048,20190409T0100+0100,763.0,731.440433975452,31.559566024548,-18.9219050044072,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240051,20190409T0100+0100,763.0,759.263887556968,3.73611244303163,0.413939459875564,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240053,20190409T0100+0100,763.0,772.08493770272,-9.08493770272014,2.20274174949645,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240058,20190409T0100+0100,763.0,753.52711746871,9.47288253129022,-3.24097707673673,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240070,20190409T0100+0100,763.0,755.296919111234,7.70308088876629,-2.35013388510936,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240038,20190418T0100+0100,825.0,808.635493624115,16.3645063758852,1.56402125933107,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240060,20190418T0100+0100,825.0,799.31065734608,25.6893426539195,5.93475743172689,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240059,20190418T0100+0100,825.0,807.302668315379,17.6973316846213,-1.41594609124354,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240062,20190418T0100+0100,825.0,793.479953253824,31.5200467461758,3.56417815400289,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240063,20190418T0100+0100,825.0,802.131954911443,22.8680450885572,-12.9785790052881,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240065,20190418T0100+0100,825.0,814.510841379598,10.4891586204019,9.99342566568157,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240072,20190418T0100+0100,825.0,800.114022474199,24.8859775258005,8.82662928913567,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240039,20190411T0100+0100,778.0,769.312096200532,8.68790379946836,-5.49834279053141,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240045,20190411T0100+0100,778.0,768.819821035143,9.18017896485685,1.74415794739548,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240049,20190411T0100+0100,778.0,758.338306193816,19.6616938061841,-1.70868692954264,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240052,20190411T0100+0100,778.0,781.321521116813,-3.32152111681285,5.16399221729307,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240054,20190411T0100+0100,778.0,791.91391347154,-13.9139134715402,-22.5167650261208,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240057,20190411T0100+0100,778.0,775.524456871914,2.47554312808597,-11.3904012381726,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240056,20190411T0100+0100,778.0,781.100080959038,-3.10008095903822,6.78168326431864,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240055,20190411T0100+0100,778.0,785.737648577949,-7.73764857794947,0.662738332223626,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240066,20190411T0100+0100,778.0,772.124375181511,5.87562481848931,9.81845088495402,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240068,20190411T0100+0100,778.0,782.530267978596,-4.53026797859593,-16.70076478729,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240067,20190411T0100+0100,778.0,786.978925721709,-8.97892572170906,7.15717496597108,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240041,20190415T0100+0100,795.0,799.265140696001,-4.26514069600114,5.39362180487581,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240046,20190415T0100+0100,795.0,778.675769172627,16.3242308273728,-5.74095825586539,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240044,20190415T0100+0100,795.0,791.468829063144,3.53117093685637,-2.16011661040829,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240043,20190415T0100+0100,795.0,796.257190914185,-1.257190914185,11.756908521859,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240050,20190415T0100+0100,795.0,782.975231588352,12.0247684116475,-2.09986947303059,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240064,20190415T0100+0100,795.0,778.985460375965,16.0145396240348,-1.30637619550941,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240071,20190415T0100+0100,795.0,779.084137272565,15.9158627274346,-2.22349844160692,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240069,20190415T0100+0100,795.0,794.116046414524,0.883953585476434,4.45667654667614,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240042,20190401T0100+0100,706.0,715.180155287528,-9.18015528752835,-4.53456557530399,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240047,20190422T0100+0100,882.0,857.564421829878,24.4355781701224,19.849552864492,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240061,20190422T0100+0100,882.0,842.042904052356,39.9570959476442,19.2627794787138,NA,luroth,9488,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye

Data/Trait_Validation/trait_data_FPWW024_lot4_trait_id_45_method_id_314.csv

+plot.UID,timestamp,value,corrected_value,spatial_trend,spatial_residual,value_json,responsible,measurement_id,trait.id,trait.label,trait.name,trait.si_unit,method.id,method.label,method.name
+FPWW0240109,20190405T0100+0100,734.0,724.249286438139,9.7507135618614,4.53456557530626,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240126,20190405T0100+0100,734.0,757.767242219738,-23.7672422197384,-1.87657736787719,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240110,20190415T0100+0100,795.0,786.351596945819,8.64840305418147,-3.56417815400278,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240111,20190415T0100+0100,795.0,787.174970534414,7.82502946558566,2.09986947303128,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240112,20190415T0100+0100,795.0,788.477897086251,6.52210291374877,-5.3936218048741,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240114,20190415T0100+0100,795.0,798.305259348259,-3.30525934825903,11.3904012381724,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240119,20190415T0100+0100,795.0,783.531134155778,11.4688658442221,2.22349844160556,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240122,20190415T0100+0100,795.0,803.51734509493,-8.51734509492985,-19.2627794787121,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240130,20190415T0100+0100,795.0,787.441142482627,7.5588575173731,-5.93475743172667,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240129,20190415T0100+0100,795.0,790.15768568436,4.84231431564035,5.7409582558671,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240137,20190415T0100+0100,795.0,810.134560497865,-15.1345604978653,1.41594609124309,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240138,20190415T0100+0100,795.0,817.865316100892,-22.8653161008921,-19.8495528644935,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240142,20190415T0100+0100,795.0,795.78906228396,-0.789062283960106,2.16011661040818,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240140,20190415T0100+0100,795.0,805.507451105453,-10.5074511054529,-1.56402125933084,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240113,20190409T0100+0100,763.0,759.997186881451,3.00281311854917,2.35013388510777,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240116,20190409T0100+0100,763.0,758.436008637227,4.56399136277275,-0.41393945986556,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240123,20190409T0100+0100,763.0,772.743373870468,-9.74337387046785,-11.7569085218581,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240132,20190409T0100+0100,763.0,752.487473411602,10.5125265883984,-9.81845088495504,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240128,20190409T0100+0100,763.0,763.422144892476,-0.422144892475785,11.8272628133867,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240127,20190409T0100+0100,763.0,770.993536682226,-7.99353668222614,-5.16399221729364,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240134,20190409T0100+0100,763.0,767.679454203727,-4.67945420372723,-2.20274174949645,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240136,20190409T0100+0100,763.0,772.664575789768,-9.66457578976781,-7.15717496597017,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240144,20190409T0100+0100,763.0,760.009071622185,2.99092837781518,3.24097707673832,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240143,20190409T0100+0100,763.0,761.7556800529,1.2443199470996,1.70868692954184,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240139,20190409T0100+0100,763.0,781.598212766984,-18.5982127669838,1.30637619550919,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240120,20190411T0100+0100,778.0,765.331505140352,12.668494859648,-1.74415794739571,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240118,20190411T0100+0100,778.0,767.536714430402,10.4632855695984,-6.78168326431796,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240117,20190411T0100+0100,778.0,769.284243984267,8.71575601573329,18.9219050044074,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240115,20190411T0100+0100,778.0,780.308781781594,-2.30878178159435,5.4983427905313,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240121,20190411T0100+0100,778.0,785.20269332117,-7.20269332116959,-4.45667654667784,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240125,20190411T0100+0100,778.0,794.523990048235,-16.5239900482352,-9.99342566568134,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240135,20190411T0100+0100,778.0,784.412171913503,-6.41217191350256,-0.662738332223284,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240141,20190411T0100+0100,778.0,782.460763895928,-4.46076389592827,-8.82662928913555,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240124,20190418T0100+0100,825.0,836.947443523782,-11.9474435237822,22.5167650261212,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240131,20190418T0100+0100,825.0,815.931797553177,9.06820244682353,16.7007647872905,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye
+FPWW0240133,20190418T0100+0100,825.0,828.089112922019,-3.08911292201878,12.9785790052879,NA,luroth,9489,45,PltBBCH30,Beginning stem elongation,deg C d,314,NA,Growth stage determination based on BBCH rating by eye

Data/genotypes.csv

+genotype.crop,genotype.id,genotype.name
+Crop.wheat,236,INNOV
+Crop.wheat,369,RENAN
+Crop.wheat,190,ISENGRAIN
+Crop.wheat,343,MONTY
+Crop.wheat,231,BUENO
+Crop.wheat,9,FORNO
+Crop.wheat,69,HERMANN
+Crop.wheat,64,ESKET
+Crop.wheat,128,WINNETOU
+Crop.wheat,273,FRIDOLIN
+Crop.wheat,377,HUSSAR
+Crop.wheat,424,CH NARA
+Crop.wheat,349,VELOCITY
+Crop.wheat,168,DINOSOR
+Crop.wheat,153,AZZURO
+Crop.wheat,162,CARIBOU
+Crop.wheat,1,CH CLARO
+Crop.wheat,195,MAXYL
+Crop.wheat,111,SOBI
+Crop.wheat,70,HEROLDO
+Crop.wheat,76,KOCH
+Crop.wheat,292,KORWETA
+Crop.wheat,63,FEDOR
+Crop.wheat,159,BRANDO
+Crop.wheat,150,AUTAN
+Crop.wheat,210,PULSAR
+Crop.wheat,14,MULAN
+Crop.wheat,305,SMUGA
+Crop.wheat,125,TUKAN
+Crop.wheat,324,BROMPTON
+Crop.wheat,447,FIORINA
+Crop.wheat,29,SURETTA
+Crop.wheat,274,GLOBUS
+Crop.wheat,378,URBAN
+Crop.wheat,302,RYWALKA
+Crop.wheat,79,LEIFFER
+Crop.wheat,291,KOBRA PLUS
+Crop.wheat,101,PRIVILEG
+Crop.wheat,61,ENORM
+Crop.wheat,91,MIRAGE
+Crop.wheat,208,PR 22 R 28
+Crop.wheat,450,SAILOR
+Crop.wheat,270,ELEMENT
+Crop.wheat,334,GLASGOW
+Crop.wheat,229,INTÉRÊT
+Crop.wheat,179,GRISBY
+Crop.wheat,13,CAPHORN
+Crop.wheat,284,BATUTA
+Crop.wheat,467,SHERIFF
+Crop.wheat,254,FASTNET
+Crop.wheat,52,CENTRUM
+Crop.wheat,166,CHARGER
+Crop.wheat,232,H05581A
+Crop.wheat,332,GATSBY
+Crop.wheat,300,NUTKA
+Crop.wheat,304,SATYNA
+Crop.wheat,30,RUNAL
+Crop.wheat,171,EQUILIBRE
+Crop.wheat,226,CCB INGÉNIO
+Crop.wheat,152,AZIMUT
+Crop.wheat,106,ROMANUS
+Crop.wheat,413,HYSTAR
+Crop.wheat,320,SW HURTIG
+Crop.wheat,113,SOLITÄR
+Crop.wheat,243,EUCLIDE
+Crop.wheat,121,TORAS
+Crop.wheat,60,DRIFTER
+Crop.wheat,151,AVANTAGE
+Crop.wheat,446,ARNOLD
+Crop.wheat,141,ACIENDA
+Crop.wheat,464,GAUDIO
+Crop.wheat,278,BANQUET
+Crop.wheat,356,APOLLO
+Crop.wheat,340,MALACCA
+Crop.wheat,28,FOREL
+Crop.wheat,445,MOLINERA
+Crop.wheat,317,SW HARNESK
+Crop.wheat,373,TRAVIX
+Crop.wheat,368,RAMIRO
+Crop.wheat,218,SEMAFOR
+Crop.wheat,448,BERNSTEIN
+Crop.wheat,142,AGUILA
+Crop.wheat,359,HANSEAT
+Crop.wheat,183,INCISIF
+Crop.wheat,269,CAPO
+Crop.wheat,54,CETUS
+Crop.wheat,238,RECITAL
+Crop.wheat,326,CONSORT
+Crop.wheat,463,GENIUS
+Crop.wheat,19,CH COMBIN
+Crop.wheat,339,LIMERICK
+Crop.wheat,465,DILAGO
+Crop.wheat,319,SW SKOTTE
+Crop.wheat,233,H04438
+Crop.wheat,39,ATLANTIS
+Crop.wheat,116,SW TOPPER
+Crop.wheat,256,HEREFORD
+Crop.wheat,6,ARINA
+Crop.wheat,67,GREIF
+Crop.wheat,177,GARCIA
+Crop.wheat,25,CH CAMEDO
+Crop.wheat,228,CCB PRÉFÉRENCE
+Crop.wheat,73,JAFET
+Crop.wheat,215,SAMURAI
+Crop.wheat,344,MUSKETEER
+Crop.wheat,102,PROFILUS
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