Commit ae4cf7eb authored by baumanph's avatar baumanph
Browse files

Add directory tree

parent 64b955ae
---
title: "Mid-infrared spectroscopy to diagnose Yam (*Diascorea* sp.) mineral nutrients"
output: rmarkdown::github_document
---
\ No newline at end of file
---
# Project structure
The file structure is as follows:
```{r, echo=FALSE}
fs::dir_tree(path = here::here(), recurse = 3)
```
Mid-infrared spectroscopy to diagnose Yam (*Diascorea* sp.) mineral nutrients
================
Project structure
=================
The file structure is as follows:
## /media/ssd/nas-ethz/doktorat/projects/01_spectroscopy/23_yamsys-plantspec-publication
## ├── 10_compile-ref-data.R
## ├── 20_summarize-ref-data.R
## ├── 23_yamsys-plantspec-publication.Rproj
## ├── 30_read-process-spc-train.R
## ├── 40_build-spc-models-tuber-train.R
## ├── 50_read-process-spc-test.R
## ├── 60_explore-spc-training-test.R
## ├── 70_evaluate-test.R
## ├── 90_model-test-train-fusion.R
## ├── README.Rmd
## ├── README.md
## ├── data
## │ ├── test
## │ │ └── tuber
## │ │ ├── elements
## │ │ ├── sampling
## │ │ └── spectra
## │ ├── test_beatrice
## │ │ ├── tuber_85_test.0
## │ │ └── tuber_85_test.1
## │ └── training
## │ ├── elements
## │ │ ├── leaf_elements.csv
## │ │ ├── raw
## │ │ └── tuber_elements.csv
## │ ├── sampling
## │ │ ├── data_field_lo.csv
## │ │ ├── data_field_mo.csv
## │ │ ├── data_field_sb.csv
## │ │ ├── data_field_tb.csv
## │ │ └── metadata-field-yamsys.csv
## │ └── spectra
## │ ├── leaf
## │ └── tuber
## ├── gpl.md
## ├── models
## │ └── training
## │ ├── leaf
## │ └── tuber
## │ ├── pls_tuber_C.Rds
## │ ├── pls_tuber_Ca.Rds
## │ ├── pls_tuber_Cu.Rds
## │ ├── pls_tuber_Fe.Rds
## │ ├── pls_tuber_K.Rds
## │ ├── pls_tuber_Mg.Rds
## │ ├── pls_tuber_N.Rds
## │ ├── pls_tuber_P.Rds
## │ ├── pls_tuber_S.Rds
## │ └── pls_tuber_Zn.Rds
## └── out
## └── figs
## ├── model-eval-yam-tuber-all.pdf
## └── spc-train-test-expl.pdf
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